The detailed information of tRNA gene sequence


Sequence ID>W2011410214
Genome IDRDQE01000002
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalorubrum sp. ZY8 [RDQE]
Start position on genome 56498
End posion on genome 56572
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gcggacgcac
tRNA gene sequence 
GCTCTGGTGGTGTAGTCCGGCCAATCATCTTGCCCTCTCACGGCAAGGACCAGGGTTCAA
ATCCCTGCCGGAGCAtcc
Downstream region at tRNA end position 
aaccccgtcg
Secondary structure (Cloverleaf model)
>W2011410214	Glu	CTC
                   c      Atcc aaccccgtcg
                     G - C
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C
                     G - C          T A
                    T     G T C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       C A G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        C     GGAC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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