The detailed information of tRNA gene sequence


Sequence ID>W2011410342
Genome IDRDQG01000078
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalalkalicoccus sp. GSM28 [RDQG]
Start position on genome 48279
End posion on genome 48206
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cgatgttagt
tRNA gene sequence 
GCCGGAGTAGCTCAGCCTGGCAGAGCAACTCCTTTGTAAGGAGTCAGTCACGAGTTCAAA
TCTCTTCTCCGGCTtct
Downstream region at tRNA end position 
ctaaaccagt
Secondary structure (Cloverleaf model)
>W2011410342	Thr	TGT
                   t      Ttct ctaaaccagt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T C T C     A
      C G A        A      |   | | |     A
    C       C T C G       A C G A G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     CAGTC
                    A - T
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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