The detailed information of tRNA gene sequence


Sequence ID>W2011430930
Genome IDRIZB01000001
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalarchaeum sp. CBA1220 [RIZB]
Start position on genome 1743258
End posion on genome 1743343
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catcgagcgg
tRNA gene sequence 
GTCGTGGTAGCCTAGCCTGGTCAAGGCGCAGGGTTGCTAACTCTGTGGCTCACCGCCTCC
GGGGTTCAAATCCCCGCCACGACGCCt
Downstream region at tRNA end position 
ctccacacat
Secondary structure (Cloverleaf model)
>W2011430930	Ser	GCT
                   g      GCCt ctccacacat
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G C C C C     A
    C C G A        A      | | | | |     A
  T         T C C G       C G G G G     C
  G         | | | |                 T T
  G         A G G C
    T C A          G     TGGCTCACCGCCTC
                    C - G
                    A - T
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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