The detailed information of tRNA gene sequence


Sequence ID>W2011581569
Genome IDSHMP01000003
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHaloterrigena hispanica DSM 18328 [SHMP]
Start position on genome 517808
End posion on genome 517732
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aagaaaatgc
tRNA gene sequence 
GCCAAGGTGGCAGAGTCCGGCCGAACGCAGCGGCCTGCAGAGCCGCCCACCGCCGGTTCA
AATCCGGCCCTTGGCTCtt
Downstream region at tRNA end position 
ctacgttttt
Secondary structure (Cloverleaf model)
>W2011581569	Cys	GCA
                   c      TCtt ctacgttttt
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C G G C C     A
    C T G A        G      | | | | |     A
  C         G A C G       G C C G G     C
  G             | |                 T T
  G         A C G C
    C C G A        A     CCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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