The detailed information of tRNA gene sequence


Sequence ID>W2011589136
Genome IDSIJA01000072
Search identical group
Phylum/ClassMethanobacteriota
SpeciesMethanocorpusculum sp. GPch4 [SIJA]
Start position on genome 15782
End posion on genome 15859
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cagcgcgcct
tRNA gene sequence 
CGGGGTGTAGCTCAGCTTGGATAGAGCGCTAGCATGGGGCGCTAGAGGCCCCCGGTTCAA
ATCCGGGCACTCCGACCA
Downstream region at tRNA end position 
gcggacaaac
Secondary structure (Cloverleaf model)
>W2011589136	Pro	GGG
                   t      ACCA gcggacaaac
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T A
                    T     G G G C C     A
    T C G A        A      | | | | |     A
  T         C T C G       C C C G G     C
  G         | | | |                 T T
  G         G A G C
    A T A          G     AGGCC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  A       C
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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