The detailed information of tRNA gene sequence


Sequence ID>SRA1030422
Genome IDSRR035087.278370
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 440
End posion on genome 365
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttcaggtac
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGCAGAGCGTCGGACTCCAAATCCGGGGGTTGGGGGTTCGAAT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ctaaatagta
Secondary structure (Cloverleaf model)
>SRA1030422	Trp	CCA
                   c      GCCA ctaaatagta
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     GGGTT
                    T + G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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