The detailed information of tRNA gene sequence


Sequence ID>W2011970649
Genome IDVCAT01000001
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHaloferacaceae archaeon KCTC 4243 [VCAT]
Start position on genome 619021
End posion on genome 618950
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cccgatacgc
tRNA gene sequence 
GGGACCGTAGGGTAGTGGTATCCTCGGCGCATGGGGTGCGTCGGACCTGAGTTCGAATCT
CGGCGGTCCCACtg
Downstream region at tRNA end position 
ttcatgctcg
Secondary structure (Cloverleaf model)
>W2011970649	Pro	GGG
                   c      ACtg ttcatgctcg
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     G G C T C     A
        G A        A      | + | | |     G
      T     T G G G       C T G A G     C
      G       | | +                 T T
      G     T C C T
        T A        C     GGAC
                    G - C
                    G + T
                    C - G
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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