The detailed information of tRNA gene sequence


Sequence ID>W2012093989
Genome IDVMTR01000255
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHaloferax volcanii SS0101 [VMTR]
Start position on genome 298
End posion on genome 221
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaatcggccG
tRNA gene sequence 
AGGGCCCCTAGCTCAGTCTGGTCAGAGCGCTCGGCTCATAACCGGGTGGTCATGGGTTCG
AACCCCATGGGCCCATAat
Downstream region at tRNA end position 
aattttagtc
Secondary structure (Cloverleaf model)
>W2012093989	Met	CAT
                   G      TAat aattttagtc
                     A   A
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G          C A
                    C     T A C C C     A
    T G A C        T      | | | | |     G
  C         T C G A       A T G G G     C
  T         +                       T T
  G         G A G C
    G T C A        G     TGGTC
                    C - G
                    T + G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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