The detailed information of tRNA gene sequence


Sequence ID>W2012105124
Genome IDVOLB01000001
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalorhabdus sp. CUG00001 [VOLB]
Start position on genome 1958995
End posion on genome 1958924
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tacggcggaa
tRNA gene sequence 
GGGCCCATAGCTCAGCGGTAGAGTGCCTCCTTTGCAAGGAGGATGCCCTGGGTTCAAATC
CCAGTGGGTCCAtag
Downstream region at tRNA end position 
ctcgtgtccg
Secondary structure (Cloverleaf model)
>W2012105124	Ala	TGC
                   a      Atag ctcgtgtccg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G A C C C     A
        G A        A      | | | | |     A
      C     C T C G       C T G G G     C
      G     | | | +                 T T
      G     G A G T
        T A        G     ATGCC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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