The detailed information of tRNA gene sequence


Sequence ID>W2012105131
Genome IDVOLB01000001
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalorhabdus sp. CUG00001 [VOLB]
Start position on genome 1386698
End posion on genome 1386613
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgacattgtt
tRNA gene sequence 
GCCGAGGTAGCCTAGCCTGGCCAAGGCGCCTGCCTCGAGAGCAGGTGTCCTCACGGACTC
GAGAGTTCAAATCTCTCCCTCGGCGCtt
Downstream region at tRNA end position 
ctacttccga
Secondary structure (Cloverleaf model)
>W2012105131	Ser	CGA
                   t      GCtt ctacttccga
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
    C C G A        A      | | | | |     A
  T         T C C G       G A G A G     C
  G         | | | |                 T T
  G         A G G C
    C C A          G     TGTCCTCACGGACTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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