The detailed information of tRNA gene sequence


Sequence ID>W2012105133
Genome IDVOLB01000001
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalorhabdus sp. CUG00001 [VOLB]
Start position on genome 879579
End posion on genome 879507
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
aaccacgaga
tRNA gene sequence 
GGGCGCGTAGCTCAGTGGACAGAGTACTTGGTTCCGGACCAAGAGGTCAGGGGTTCAAAT
CCCTTCGCGCCCGtaa
Downstream region at tRNA end position 
cattttgctg
Secondary structure (Cloverleaf model)
>W2012105133	Arg	CCG
                   a      Gtaa cattttgctg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | + | | |     A
    G       C T C G       A G G G G     C
    G       | | | +                 T T
    A       G A G T
      C A          A     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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