The detailed information of tRNA gene sequence


Sequence ID>W2012156995
Genome IDVUYS01000006
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosocosmicus sp. SS [VUYS]
Start position on genome 105696
End posion on genome 105621
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttctatgaaa
tRNA gene sequence 
GGATGGGTAGTCTAGGCTGGTTAGGATACCTGTCTCACACACAGGTGGTCGAGAGTTCAA
ATCTCTCCTCATCCACtc
Downstream region at tRNA end position 
atgtaattaa
Secondary structure (Cloverleaf model)
>W2012156995	Val	CAC
                   a      ACtc atgtaattaa
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G + T
                     G - C          T A
                    T     C T C T C     A
    C G G A        A      | | | | |     A
  T         T C T G       G A G A G     C
  G         + | | +                 T T
  G         G G A T
    T T A          A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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