The detailed information of tRNA gene sequence


Sequence ID>W2012376960
Genome IDWMFC01000015
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalorubrum terrestre 22502_06_Cabo [WMFC]
Start position on genome 5254
End posion on genome 5179
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
tgatacgagc
tRNA gene sequence 
GGGCCCTTAGCTTAGTCCGGTTAAAGCGACTCGCTCATAACGAGTCGATCGCCGGTTCGA
ATCCGGCAGGGCCCACtt
Downstream region at tRNA end position 
tctatcggac
Secondary structure (Cloverleaf model)
>W2012376960	Ile2	CAT
                   c      ACtt tctatcggac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C G G C C     A
    C T G A        A      | | | | |     G
  C         T T C G       G C C G G     C
  G         | | | |                 T T
  G         A A G C
    T T A          G     CGATC
                    A - T
                    C - G
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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