The detailed information of tRNA gene sequence


Sequence ID>W2012409855
Genome IDWPCA01000006
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalapricum sp. CBA1109 [WPCA]
Start position on genome 22503
End posion on genome 22430
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttctggtgtc
tRNA gene sequence 
GGGTCCGTGGTCTAGTTGGTTATGACGCGGCCTTTACAAGGCCGAAATCGGCGGTTCAAC
TCCGCCCGGGCCCAtat
Downstream region at tRNA end position 
tctcgacgag
Secondary structure (Cloverleaf model)
>W2012409855	Val	TAC
                   c      Atat tctcgacgag
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T C
                    T     C C G C C     A
      T G A        G      | | | | |     A
    T       T C T G       G G C G G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AAATC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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