The detailed information of tRNA gene sequence


Sequence ID>W2012409860
Genome IDWPCA01000020
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalapricum sp. CBA1109 [WPCA]
Start position on genome 16965
End posion on genome 16890
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ggacgcggac
tRNA gene sequence 
GCTCGGTTAGTGTAGTCCGGCCAATCATACGGGCCTTTCGAGCCTGTGACAGGGGTTCAA
ATCCCCTACCGAGCACat
Downstream region at tRNA end position 
tcctctcaca
Secondary structure (Cloverleaf model)
>W2012409860	Glu	TTC
                   c      ACat tcctctcaca
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T C C C C     A
    C T G A        A      | | | | |     A
  C         T G T G       A G G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        A     TGAC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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