The detailed information of tRNA gene sequence


Sequence ID>W2012409865
Genome IDWPCA01000031
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalapricum sp. CBA1109 [WPCA]
Start position on genome 13725
End posion on genome 13640
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtcgatgcgT
tRNA gene sequence 
GCCGGGATGGCCGAATCTGGTAAGGCGCACGCCTGGAAAGCGTGTTCCCGTTTGGGATTC
GGGGTTCAAATCCCCGTCCCGGCGTtc
Downstream region at tRNA end position 
tactgcgaac
Secondary structure (Cloverleaf model)
>W2012409865	Ser	GGA
                   T      GTtc tactgcgaac
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G C C C C     A
      T A A        G      | | | | |     A
    C       G C C G       C G G G G     C
    T         | | |                 T T
    G       A G G C
      G T A        G     TTCCCGTTTGGGATT
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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