The detailed information of tRNA gene sequence


Sequence ID>W2012433201
Genome IDWSZK01000017
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalomarina oriensis JCM 16495 [WSZK]
Start position on genome 128569
End posion on genome 128642
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
atgagaacgc
tRNA gene sequence 
GGGGCCGTGGGGTAGCCTGGTATCCTCGGCGGATGGGGTCCGTCGGACCTGAGTTCGAAT
CTCAGCGGTCCCACtt
Downstream region at tRNA end position 
cacgttttac
Secondary structure (Cloverleaf model)
>W2012433201	Pro	GGG
                   c      ACtt cacgttttac
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C          T A
                    T     G A C T C     A
      C G A        G      | | | | |     G
    C       T G G G       C T G A G     C
    T         | | +                 T T
    G       T C C T
      G T A        C     GGAC
                    G - C
                    G + T
                    C - G
                    G - C
                    G - C
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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