The detailed information of tRNA gene sequence


Sequence ID>W2020001115
Genome IDRRCH01000009
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalomarina oriensis SPP-AMP-1 [RRCH]
Start position on genome 21893
End posion on genome 21821
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tatggaatgc
tRNA gene sequence 
GGGCCGGTGGGGTAGCTTGGTATCCTTCGGCCTTCGGGTGGCCGTAACCGCAGTTCGAAT
CTGCGCCGGCCCAttt
Downstream region at tRNA end position 
ctgcccgcac
Secondary structure (Cloverleaf model)
>W2020001115	Pro	CGG
                   c      Attt ctgcccgcac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G C G T C     A
      C G A        G      | | | | |     G
    T       T G G G       C G C A G     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TAAC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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