The detailed information of tRNA gene sequence


Sequence ID>W2020001209
Genome IDSAYS01000004
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalobacteriaceae bacterium SHR40 [SAYS]
Start position on genome 231301
End posion on genome 231219
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cggcccactt
tRNA gene sequence 
GCCGTGTCTGAGGATCGGTGACCTCACTGACCTGCTACGTCAGCCCCGGTGACGGGTTCT
CGGTTCGACTCCGAGACACGGCGtcc
Downstream region at tRNA end position 
tgccttcggc
Secondary structure (Cloverleaf model)
>W2020001209	Ser	GCT
                   t      Gtcc tgccttcggc
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     G - C
                     T - A          T C
                    C     G A G C C     A
      C T A        T      | | | | |     G
    G       G G A G       C T C G G     C
    G       | | | |                 T T
    T       C C T C
      G A          A     CCCCGGTGACGGGTT
                    C - G
                    T - A
                    G - C
                    A - T
                    C - G
                  C       C
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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