The detailed information of tRNA gene sequence


Sequence ID>W2030015739
Genome IDJACHFY010000003
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfurisphaera ohwakuensis DSM 12421 [JACHFY]
Start position on genome 155119
End posion on genome 155206
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttgaatacat
tRNA gene sequence 
GCCGGGGTGGCCGAGAGGTTAAGGCGGCGGGCCGCAGACCCGTTATTTCGCGGGTTCAAG
TCCCGCCCCCGGCtatt
Downstream region at tRNA end position 
taaaaaattt
Secondary structure (Cloverleaf model)
>W2030015739	Cys	GCA
                   t      tatt taaaaaattt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      A G A        G      | | | | |     A
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TATTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  C       G *
                    G C A
intron: position=38, length=14 (in A-loop)
AGTTTATTGCAGAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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