The detailed information of tRNA gene sequence


Sequence ID>W2030017236
Genome IDJWKU01000050
Search identical group
Phylum/ClassUnclassified
Speciesarchaeon GW2011_AR13 [JWKU]
Start position on genome 42147
End posion on genome 42244
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gttttactaT
tRNA gene sequence 
GGCTCCGTAGCTCAGCCTGGTTAGAGCACCAGACTCTTAATCTGGGTGTCGCGGGTTCAA
CTCCCGTCGGGGTCAaat
Downstream region at tRNA end position 
atatacaaac
Secondary structure (Cloverleaf model)
>W2030017236	Lys	CTT
                   T      Aaat atatacaaac
                     G - C
                     G + T
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T C
                    T     T G C C C     A
    C C G A        A      + | | | |     A
  T         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     GTGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A *
                    C T T
intron: position=38, length=21 (in A-loop)
GATTTAATTATCAATGGAGAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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