The detailed information of tRNA gene sequence


Sequence ID>W2030035411
Genome IDRCMB01000011
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosotalea sp. TS [RCMB]
Start position on genome 6911
End posion on genome 6821
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gctattttgc
tRNA gene sequence 
GGGTCTATGGCTCAGCCAGGTAGAGCGAGGGACTCTTAATCCCTATGTCGTGGGTTCAAA
TCCCACTAGACCCGCta
Downstream region at tRNA end position 
gatttcatat
Secondary structure (Cloverleaf model)
>W2030035411	Lys	CTT
                   c      GCta gatttcatat
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    C       C T C G       G T G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     ATGTC
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    C T T
intron: position=38, length=16 (in A-loop)
TGATCATTTCGGAGAC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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