The detailed information of tRNA gene sequence


Sequence ID>W2030041852
Genome IDSNYS01000005
Search identical group
Phylum/ClassMethanobacteriota
SpeciesMethanimicrococcus blatticola DSM 13328 [SNYS]
Start position on genome 53136
End posion on genome 53228
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
cgatacttcT
tRNA gene sequence 
GGGCCTATAGGGTAGCGGATATCCTGACGGACTTCGAATCCGTCGACTTGCGTTCGAGTC
GCAATAGGCCCGttt
Downstream region at tRNA end position 
ttatttttct
Secondary structure (Cloverleaf model)
>W2030041852	Arg	TCG
                   T      Gttt ttatttttct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     A A C G C     A
      C G A        A      | | | | |     G
    G       T G G G       T T G C G     C
    G         | | +                 T T
    A       T C C T
      T A          G     CGAC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T C G
intron: position=38, length=19 (in A-loop)
AACATTTGCTTGTGAAGAC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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