The detailed information of tRNA gene sequence


Sequence ID>W2030064818
Genome IDWGGD01000005
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfuracidifex metallicus DSM 6482 = JCM 9184 [WGGD]
Start position on genome 2345
End posion on genome 2432
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
attctcaagt
tRNA gene sequence 
GCCGCTGTAGCTCAGCCCGGCTAGAGCGCCGGCCTTGTAAGCCGGATGTCGCGGGTCCGA
ATCCCGCCAGCGGCtggt
Downstream region at tRNA end position 
attttccctc
Secondary structure (Cloverleaf model)
>W2030064818	Thr	TGT
                   t      tggt attttccctc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C G C C C     A
    C C G A        A      | | | | |     G
  C         C T C G       G C G G G     C
  G         | | | |                 T C
  G         G A G C
    C T A          G     ATGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T G T
intron: position=38, length=13 (in A-loop)
AGCCCTTCAAGAG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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