The detailed information of tRNA gene sequence


Sequence ID>W2060007581
Genome IDCABGHH010000164
Search identical group
Phylum/ClassMethanobacteriota
SpeciesCandidatus Methanolliviera sp. GoM_asphalt [CABGHH]
Start position on genome 3075
End posion on genome 2970
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
attcgccgtt
tRNA gene sequence 
GCCGGGGTGGCCTAGCTGGTTAGGGCGTCAGACTCATAATCTGAAGGTCGCGGGCTCGAA
TCCCGCCCCCGGCActt
Downstream region at tRNA end position 
attatggggt
Secondary structure (Cloverleaf model)
>W2060007581	Ile2	CAT
                   t      Actt attatggggt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    T       T C C G       G C G G G     C
    G       + | | |                 C T
    G       G G G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A *
                    C A T
intron: position=38, length=32 (in A-loop)
GGGTGCTTGTGTGTGGAAGAGACGCCTGGGAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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