The detailed information of tRNA gene sequence


Sequence ID>W2060015042
Genome IDFNPC01000002
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalopenitus persicus DC30,IBRC 10041,KCTC 4046 [FNPC]
Start position on genome 306049
End posion on genome 305946
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
acgcgtgcaa
tRNA gene sequence 
GCCGAAGTAGCTCAGTTGGTAGAGCGCCTCGCTGTTAACGAGGCGGTCCCAGGTTCGAGT
CCTGGCTTCGGCGctt
Downstream region at tRNA end position 
cttccgtctc
Secondary structure (Cloverleaf model)
>W2060015042	Asn	GTT
                   a      Gctt cttccgtctc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     CGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A *
                    G T T
intron: position=38, length=31 (in A-loop)
GGACGATCGGCTTTCCCCGTTCGTCGCAGTC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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