The detailed information of tRNA gene sequence


Sequence ID>W2060015453
Genome IDFRFC01000003
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosotalea sinensis Nd2 [FRFC]
Start position on genome 358460
End posion on genome 358372
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaaaaatttc
tRNA gene sequence 
GGGCCGATAGCTCAGCTTGGCTGGAGCGTTCGACTGATAATCGAAAGGTCGTGGGTTCAA
ATCCCATTCGGCCCAtat
Downstream region at tRNA end position 
tctattccac
Secondary structure (Cloverleaf model)
>W2060015453	Ile	GAT
                   c      Atat tctattccac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     T A C C C     A
    T C G A        A      + | | | |     A
  T         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    C T G          G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A *
                    G A T
intron: position=38, length=14 (in A-loop)
AAGATTATTCAGAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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