The detailed information of tRNA gene sequence


Sequence ID>W2060024612
Genome IDJACASU010000004
Search identical group
Phylum/ClassNitrososphaerota
SpeciesMarine Group I thaumarchaeote L19b [JACASU]
Start position on genome 22517
End posion on genome 22617
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
agtttagaat
tRNA gene sequence 
GCAGGGGTATCGAAGCCCGGCCAACCGAGAAGGACTCAAGATCCTTTCCCTTAGGGGTTC
GTGGGTTCAAATCCCACCTCCTGCttta
Downstream region at tRNA end position 
tttcagtttc
Secondary structure (Cloverleaf model)
>W2060024612	Leu	CAA
                   t      ttta tttcagtttc
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C A C C C     A
    C C G A        A      | | | | |     A
  C         A G C T       G T G G G     C
  G           | | |                 T T
  G         C C G A
    C C A A        G     TCCCTTAGGGGTTC
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    C A A
intron: position=38, length=16 (in A-loop)
ATTTTGGCAATGGGCC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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