The detailed information of tRNA gene sequence


Sequence ID>W2060029090
Genome IDJFZT01000017
Search identical group
Phylum/ClassThermoproteota
SpeciesCandidatus Acidianus copahuensis copahuensis ALE1 [JFZT]
Start position on genome 92541
End posion on genome 92439
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tatttgttgt
tRNA gene sequence 
GGGCCCGTAGCTCAGCCAGGAAGAGCGGTGGGCTTTTAACCCATAGGTCCCGGGTCCGAA
TCCCGGCGGGCCCGCCA
Downstream region at tRNA end position 
cacttcctta
Secondary structure (Cloverleaf model)
>W2060029090	Lys	TTT
                   t      GCCA cacttcctta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    C       C T C G       C C G G G     C
    A       | | | |                 T C
    G       G A G C
      G A A        G     AGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A *
                    T T T
intron: position=38, length=26 (in A-loop)
ACTGCAGTCCGTGCATATAGGAAGCC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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