The detailed information of tRNA gene sequence


Sequence ID>W2060031550
Genome IDMCBC01000056
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Altiarchaeales archaeon WOR_SM1_86-2 [MCBC]
Start position on genome 1345
End posion on genome 1441
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tatactatat
tRNA gene sequence 
AGCGGGGTAGGGCAGCATGGAGTGCCCGCCGGGCTCATAACCCGGAGGTCGGAAGTTCAA
GTCTTCCCCCCGCTaatg
Downstream region at tRNA end position 
aaaattgcca
Secondary structure (Cloverleaf model)
>W2060031550	fMet	CAT
                   t      aatg aaaattgcca
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C C T T C     A
    A C G A        A      | | | | |     A
  T         C G G G       G G A A G     C
  G         | | | |                 T T
  G         G C C C
    A G T          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A *
                    C A T
intron: position=38, length=22 (in A-loop)
AAGATCAATCAAAAATTGAGAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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