The detailed information of tRNA gene sequence


Sequence ID>W2060035193
Genome IDMNGZ01000018
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon 13_1_40CM_2_39_13_1 [MNGZ]
Start position on genome 458
End posion on genome 360
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttgcaagat
tRNA gene sequence 
GCCAGGTTAACCAAGTGGTAAGGTGACCGCCTCGAGAGCGGTTGTGCGTCAAGCACCCAG
GGGTTCGAATCCCTTACCTGGCGcct
Downstream region at tRNA end position 
ttaatttttc
Secondary structure (Cloverleaf model)
>W2060035193	Ser	CGA
                   t      Gcct ttaatttttc
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     T T C C C     A
        G A        A      | + | | |     G
      T     A C C A       A G G G G     C
      G       | | |                 T T
      G     A G G T
        T A        G     TGTGCGTCAAGCACCC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G *
                    C G A
intron: position=38, length=16 (in A-loop)
ATCAAGTATACAAGGT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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