The detailed information of tRNA gene sequence


Sequence ID>W2060035265
Genome IDMNHP01000035
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon 13_1_40CM_2_39_4 [MNHP]
Start position on genome 238
End posion on genome 325
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gaaaattttt
tRNA gene sequence 
GGGCCGATAGCTCAGCTTGGCTGGAGCGTTCGACTGATAATCGAAAGGTCGTGGGTTCGA
ATCCCATTCGGCCCcttt
Downstream region at tRNA end position 
gtttttatcg
Secondary structure (Cloverleaf model)
>W2060035265	Ile	GAT
                   t      cttt gtttttatcg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     T A C C C     A
    T C G A        A      + | | | |     G
  T         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    C T G          G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A *
                    G A T
intron: position=38, length=13 (in A-loop)
ATATTATTCAGAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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