The detailed information of tRNA gene sequence


Sequence ID>W2060036320
Genome IDMRZU01000004
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanonatronarchaeum thermophilum AMET1 [MRZU]
Start position on genome 24335
End posion on genome 24249
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ggacgcttgg
tRNA gene sequence 
GGGCCCGTAGATCAACGGTAGATCGCCACCTTTGCAAGGTGGAGGCTCTGGGTTCGAATC
CCAGCGGGTCCAttt
Downstream region at tRNA end position 
tagattgatt
Secondary structure (Cloverleaf model)
>W2060036320	Ala	TGC
                   g      Attt tagattgatt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C C C     A
        A A        A      | | | | |     G
      C     C T A G       C T G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCT
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A *
                    T G C
intron: position=38, length=15 (in A-loop)
ACACAAACGCAGAAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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