The detailed information of tRNA gene sequence


Sequence ID>W2060048549
Genome IDQEFN01000004
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus sp. SCGC AB-777_G06 [QEFN]
Start position on genome 32164
End posion on genome 32261
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
aaaaatatat
tRNA gene sequence 
GCCGCCGTAGCTCAGACTGGTAGAGCGCCGGCCTCGTAAGCCGGTGGTCCGGGGTTCAAG
TCCCCGCGGCGGCtttt
Downstream region at tRNA end position 
ggtgattaaa
Secondary structure (Cloverleaf model)
>W2060048549	Thr	CGT
                   t      tttt ggtgattaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G C C C C     A
      A G A        A      | | | | |     A
    C       C T C G       C G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    C G T
intron: position=38, length=24 (in A-loop)
AGGTATAGTAGCAGGATCCGGTAC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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