The detailed information of tRNA gene sequence


Sequence ID>W2060053001
Genome IDQYYE01000148
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Bathyarchaeota archaeon archaeon BE326-BA-RLH [QYYE]
Start position on genome 4585
End posion on genome 4693
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tatgtagcgc
tRNA gene sequence 
GCCGGGGTCTCCTAGCCAGGCAGGGAGCAAGCCTGGAGAGCTTGTGGCCTCTCGGGGCCG
CGGGGGTTCAAATCCCCCTCCCGGCGCCt
Downstream region at tRNA end position 
aaattttggt
Secondary structure (Cloverleaf model)
>W2060053001	Ser	GGA
                   c      GCCt aaattttggt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C C C C C     A
      C G A        C      | | | | |     A
    C       T C C T       G G G G G     C
    A       + | | |                 T T
    G       G G G A
      G C A        G     TGGCCTCTCGGGGCCGC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G *
                    G G A
intron: position=38, length=20 (in A-loop)
ATCCCCACTTGGGACCAAAC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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