The detailed information of tRNA gene sequence


Sequence ID>W2060053419
Genome IDRAPO01000003
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalopiger aswanensis DSM 13151 [RAPO]
Start position on genome 592871
End posion on genome 592975
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
atgtgctcga
tRNA gene sequence 
GGGCACGTAGCTCAGTCTGGATAAGAGCGTCGGACTTCTAATCCGACGGTCGTGGGTTCA
AATCCCATCGTGCCCtgat
Downstream region at tRNA end position 
tctgcgacga
Secondary structure (Cloverleaf model)
>W2060053419	Arg	TCT
                   a      tgat tctgcgacga
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     T A C C C     A
    C T G A        A      + | | | |     A
  T         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    A T A A        G     CGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T C T
intron: position=38, length=29 (in A-loop)
TCCTCGTCGCGTCTGCGATGGGGGAAGAC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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