The detailed information of tRNA gene sequence


Sequence ID>W2060091235
Genome IDWGGD01000005
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfuracidifex metallicus DSM 6482 = JCM 9184 [WGGD]
Start position on genome 643264
End posion on genome 643174
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
acttaaagaa
tRNA gene sequence 
GGGCCCGTGGTCTAGCCTGGTTAGGACGCCGCCCTTACAAGGCGGAGGTCTCGGGTTCAA
CTCCCGACGGGCCCAtat
Downstream region at tRNA end position 
taagttctag
Secondary structure (Cloverleaf model)
>W2060091235	Val	TAC
                   a      Atat taagttctag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     A G C C C     A
    C C G A        G      | | | | |     A
  T         T C T G       T C G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A *
                    T A C
intron: position=38, length=16 (in A-loop)
AGCCAAATTCTAAGAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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