The detailed information of tRNA gene sequence


Sequence ID>W2060096816
Genome IDWUUT01000002
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalovenus sp. WSH3 [WUUT]
Start position on genome 448458
End posion on genome 448562
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ggagggatgc
tRNA gene sequence 
GGGCCCGTAGCTCAGTCTGGTAAGAGCCCCCGGCTCATAACCGGGTATGCGGTGGTTCAA
ATCCGCCCGGGCCCtgcc
Downstream region at tRNA end position 
tgtgaggaac
Secondary structure (Cloverleaf model)
>W2060096816	Ile2	CAT
                   c      tgcc tgtgaggaac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C G C C     A
    C T G A        A      | | + | |     A
  T         C T C G       G G T G G     C
  G         | | | |                 T T
  G         G A G C
    T A A          C     TATGC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    C A T
intron: position=38, length=30 (in A-loop)
CGATAGCAAGGTCGGCTTGGTATCTGGGTT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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