The detailed information of tRNA gene sequence


Sequence ID>W2030052618
Genome IDVUYS01000014
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosocosmicus sp. SS [VUYS]
Start position on genome 66284
End posion on genome 66368
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caaatcctat
tRNA gene sequence 
GGTGGGGTGGCAGAGCGGCCATGCGTTCGCCTGCAGAGCGAATATATAAGGGTTCGAATC
CCTTCCCCACCTttt
Downstream region at tRNA end position 
attagatttc
Secondary structure (Cloverleaf model)
>W2030052618	Cys	GCA
                   t      Tttt attagatttc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
        G A        G      | | | | |     G
      C     G A C G       A A G G G     C
      G       | | |                 T T
      G     A T G C
        C C        G     TATAT
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G *
                    G C A
intron: position=38, length=12 (in A-loop)
ACCAGGGCAGTT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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