The detailed information of tRNA gene sequence


Sequence ID>SRA1030539
Genome IDSRR035087.292265
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 355
End posion on genome 262
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtttttttac
tRNA gene sequence 
GGAGAGATGTCCGAGCGGCTTAAGGAGCACGACTGGAAATCGTGTGTATGCCCTCAAAGG
TGTACCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
tatattatga
Secondary structure (Cloverleaf model)
>SRA1030539	Ser	GGA
                   c      GCCA tatattatga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TGTATGCCCTCAAAGGTGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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