The detailed information of tRNA gene sequence


Sequence ID>SRA1030544
Genome IDSRR035087.292856
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 77
End posion on genome 166
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cactgatttt
tRNA gene sequence 
GGAGAATTGTCCGAGTCTGGTCTATGGTGCACGCCTGCTAAGCGTGTTGGGAGGAAACTT
CCACAAAAGTTCGAATCTTTTATTCTCCGCtt
Downstream region at tRNA end position 
ttgttttaaa
Secondary structure (Cloverleaf model)
>SRA1030544	Ser	GCT
                   t      GCtt ttgttttaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     T T T T C     A
    C T G A        G      | | | | |     G
  T         G C C T       A A A A G     C
  G         + | |                   T T
  G         T G G T
    T C T A        G     TTGGGAGGAAACTTCCAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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