The detailed information of tRNA gene sequence


Sequence ID>SRA1030572
Genome IDSRR035087.297375
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 288
End posion on genome 195
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acttttaaat
tRNA gene sequence 
GGAGAGATGACCGAGTGGCCGAAGGTGGTTGCCTGCTAAGCAATTGAGCGGGTTAAGGCC
TGCTCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttttatagg
Secondary structure (Cloverleaf model)
>SRA1030572	Ser	GCT
                   t      GCCA tttttatagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGAGCGGGTTAAGGCCTGCTCC
                    G + T
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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