The detailed information of tRNA gene sequence


Sequence ID>SRA1030845
Genome IDSRR035087.337912
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 397
End posion on genome 310
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aataaaattt
tRNA gene sequence 
GGAGAGGTGTCTGAGCGGTTGAAAGAGCTCGCTTGGAAAGCGGGTATACGGCAACGTATC
CAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
ttgttgacgc
Secondary structure (Cloverleaf model)
>SRA1030845	Ser	GGA
                   t      GCCA ttgttgacgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G T C T       C A G G G     C
    G         | | |                 T T
    T       A A G A
      T G A        G     TATACGGCAACGTATC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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