The detailed information of tRNA gene sequence


Sequence ID>SRA1030901
Genome IDSRR035087.344157
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 308
End posion on genome 232
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tctgaattga
tRNA gene sequence 
TGCGGAGTGGCGCAACTTGGCAGCGCGCGAGATTCATAATCTCGAGGTTATCGGTTCAAA
TCCGGTCTCCGCTACCA
Downstream region at tRNA end position 
gttcgggggt
Secondary structure (Cloverleaf model)
>SRA1030901	Met	CAT
                   a      ACCA gttcgggggt
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G G C C     A
      C A A        G      | + | | |     A
    T       C G C G       A T C G G     C
    T       | | | |                 T T
    G       G C G C
      G C A        G     AGGTT
                    C - G
                    G - C
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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