The detailed information of tRNA gene sequence


Sequence ID>SRA1031116
Genome IDSRR035087.375967
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 343
End posion on genome 255
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attactatgt
tRNA gene sequence 
GGAGAGGTGCCAGAGCGGTTGAATGGGGCGGTCTCGAAAACCGTTGATGGTAATACCATC
CCAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
ttataactcc
Secondary structure (Cloverleaf model)
>SRA1031116	Ser	CGA
                   t      GCCA ttataactcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G A C C       C A G G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TGATGGTAATACCATCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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