The detailed information of tRNA gene sequence


Sequence ID>SRA1031133
Genome IDSRR035087.379059
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 419
End posion on genome 494
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttatactttA
tRNA gene sequence 
AGATGAGTAGCTCAGCTGGTTAGAGTACCTATTTCGCAAGCAGGGGGTCGAAGGTTCAAA
TCCTTCCTCATCTTTat
Downstream region at tRNA end position 
ttggctctgt
Secondary structure (Cloverleaf model)
>SRA1031133	Ala	CGC
                   A      TTat ttggctctgt
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C
                     A - T
                     G - C          T A
                    T     C T T C C     A
      C G A        A      | | | | |     A
    T       C T C G       G A A G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    A   C
                    T + G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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