The detailed information of tRNA gene sequence


Sequence ID>SRA1031231
Genome IDSRR035087.395836
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 472
End posion on genome 398
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ntaataaaat
tRNA gene sequence 
GGCACGGTAGCCAAGTGGCTTTTAGGGCAGGGGACTGCAAATCCCTTTACGCGAGTTCGT
ATCTCGCCCGTGCCTtaa
Downstream region at tRNA end position 
acttgccgcg
Secondary structure (Cloverleaf model)
>SRA1031231	Cys	GCA
                   t      Ttaa acttgccgcg
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C
                     G - C          T A
                    T     C G C T C     T
    G T G A        A      | | | | |     G
  G         A C C G       G C G A G     C
  C           | | |                 T T
  T         G G G C
    T T T A        A     TTAC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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