The detailed information of tRNA gene sequence


Sequence ID>W2010071708
Genome IDAQOR01000011
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAlcanivorax sp. S71-1-4 [AQOR]
Start position on genome 65470
End posion on genome 65546
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gctgtacgtt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGGGGGTTCAAA
TCCCTCCTCCCCGACCA
Downstream region at tRNA end position 
ctctttcctc
Secondary structure (Cloverleaf model)
>W2010071708	Pro	TGG
                   t      ACCA ctctttcctc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    C       C G C G       G G G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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