The detailed information of tRNA gene sequence


Sequence ID>W2010071712
Genome IDAQOR01000011
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAlcanivorax sp. S71-1-4 [AQOR]
Start position on genome 111710
End posion on genome 111634
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gccccacttt
tRNA gene sequence 
CGGAGTATAGCTCAGCCTGGTAGAGCACTACGTTCGGGACGTAGGGGTCGTAGGTTCAAA
TCCTGCTACTCCGACCA
Downstream region at tRNA end position 
gacacaccct
Secondary structure (Cloverleaf model)
>W2010071712	Pro	CGG
                   t      ACCA gacacaccct
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T          T A
                    T     C G T C C     A
      C G A        A      | + | | |     A
    C       C T C G       G T A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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