The detailed information of tRNA gene sequence


Sequence ID>SRA1031509
Genome IDSRR035087.440793
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 88
End posion on genome 180
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agtaattcac
tRNA gene sequence 
GGAGAGGTGTCTGAGCTGGTTTAAGGTGCCGCTCTCGAAAAGCGGTGTTCGTGTCAAAGC
GGATCGAGGGTTCAAATCCCTCCCTCTCTGCTA
Downstream region at tRNA end position 
aattaataat
Secondary structure (Cloverleaf model)
>SRA1031509	Ser	CGA
                   c      GCTA aattaataat
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     A
  G         G T C T       G A G G G     C
  G           + |                   T T
  T         A G G T
    T T A          G     TGTTCGTGTCAAAGCGGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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